Publications
Microbiome Dynamics During Chemoradiotherapy for Anal Cancer
Lin D, Alam MBE, Jaoude JA, Kouzy R, Phan JL, Elnaggar JH, Resendiz B, Medrano AYD, Lynn EJ, Nguyen ND, Noticewala SS, Mathew GG, Holliday EB, Minsky BD, Das P, Morris VK, Eng C, Mezzari MP, Petrosino JF, Ajami NJ, Klopp AH, Taniguchi CM, Colbert LE. Int J Radiat Oncol Biol Phys. 2022 May 2:S0360-3016(22)00396-0. doi: 10.1016/j.ijrobp.2022.04.037. Online ahead of print. PMID: 35513187
Longitudinal Changes in Bone Mineral Measurements Inside and Outside Radiation Fields Used for Cervical Cancer Treatment
Wu J, Lakomy DS, Fellman BM, Salcedo MP, Sood AK, Jhingran A, Klopp AH, Iyer RB, Jimenez C, Colbert LE, Eifel PJ, Schmeler KM, Lin LL.Pract Radiat Oncol. 2022 Apr 4:S1879-8500(22)00124-2. doi: 10.1016/j.prro.2022.03.013. Online ahead of print. PMID: 35390531
Expansion of Candidate HPV-Specific T Cells in the Tumor Microenvironment during Chemoradiotherapy Is Prognostic in HPV16+ Cancers
Colbert LE, El MB, Lynn EJ, Bronk J, Karpinets TV, Wu X, Chapman BV, Sims TT, Lin D, Kouzy R, Sammouri J, Biegert G, Delgado Medrano AY, Olvera A, Sastry KJ, Eifel PJ, Jhingran A, Lin L, Ramondetta LM, Futreal AP, Jazaeri AA, Schmeler KM, Yue J, Mitra A, Yoshida-Court K, Wargo JA, Solley TN, Hegde V, Nookala SS, Yanamandra AV, Dorta-Estremera S, Mathew G, Kavukuntla R, Papso C, Ahmed-Kaddar M, Kim M, Zhang J, Reuben A, Holliday EB, Minsky BD, Koong AC, Koay EJ, Das P, Taniguchi CM, Klopp A. Cancer Immunol Res. 2022 Feb;10(2):259-271. doi: 10.1158/2326-6066.CIR-21-0119. Epub 2022 Jan 19. PMID: 35045973
Long-term survival following definitive radiation therapy for recurrence or oligometastases in gynecological malignancies: A landmark analysis
Corrigan KL, Yoder A, De B, Lin L, Jhingran A, Joyner MM, Eifel PJ, Colbert LE, Lu KH, Klopp AH. Gynecol Oncol. 2022 Mar;164(3):550-557. doi: 10.1016/j.ygyno.2021.12.022. Epub 2021 Dec 30. PMID: 34974906
Biology of the Radio- and Chemo-Responsiveness in HPV Malignancies
Spiotto MT, Taniguchi CM, Klopp AH, Colbert LE, Lin SH, Wang L, Frederick MJ, Osman AA, Pickering CR, Frank SJ. Semin Radiat Oncol. 2021 Oct;31(4):274-285. doi: 10.1016/j.semradonc.2021.02.009. PMID: 34455983 Review.
National Quality Measure Compliance for Palliative Bone Radiation Among Patients With Metastatic Non-Small Cell Lung Cancer
Grant SR, Smith BD, Colbert LE, Nguyen QN, Yu JB, Lin SH, Chen AB. J Natl Compr Canc Netw. 2021 May 26:1-6. doi: 10.6004/jnccn.2020.7688. Online ahead of print. PMID: 34044365
Diversity and composition of gut microbiome of cervical cancer patients: Do results of 16S rRNA sequencing and whole genome sequencing approaches align?
Biegert G, El Alam MB, Karpinets T, Wu X, Sims TT, Yoshida-Court K, Lynn EJ, Yue J, Medrano AD, Petrosino J, Mezzari MP, Ajami NJ, Solley T, Ahmed-Kaddar M, Klopp AH, Colbert LE. J Microbiol Methods. 2021 Jun;185:106213. doi: 10.1016/j.mimet.2021.106213. Epub 2021 Mar 27. PMID: 33785357
A prospective study of the adaptive changes in the gut microbiome during standard-of-care chemoradiotherapy for gynecologic cancers
El Alam MB, Sims TT, Kouzy R, Biegert GWG, Jaoude JABI, Karpinets TV, Yoshida-Court K, Wu X, Delgado-Medrano AY, Mezzari MP, Ajami NJ, Solley T, Ahmed-Kaddar M, Lin LL, Ramondetta L, Jazaeri A, Jhingran A, Eifel PJ, Schmeler KM, Wargo J, Klopp AH, Colbert LE. PLoS One. 2021 Mar 4;16(3):e0247905. doi: 10.1371/journal.pone.0247905. eCollection 2021. PMID: 33662003 Free PMC article.
Gut microbiome diversity is an independent predictor of survival in cervical cancer patients receiving chemoradiation
Sims TT, El Alam MB, Karpinets TV, Dorta-Estremera S, Hegde VL, Nookala S, Yoshida-Court K, Wu X, Biegert GWG, Delgado Medrano AY, Solley T, Ahmed-Kaddar M, Chapman BV, Sastry KJ, Mezzari MP, Petrosino JF, Lin LL, Ramondetta L, Jhingran A, Schmeler KM, Ajami NJ, Wargo J, Colbert LE, Klopp AH. Commun Biol. 2021 Feb 22;4(1):237. doi: 10.1038/s42003-021-01741-x. PMID: 33619320 Free PMC article.
Does a Custom Electronic Health Record Alert System Improve Physician Compliance With National Quality Measures for Palliative Bone Metastasis Radiotherapy?
Grant SR, Smith BD, Pandey P, Maldonado JA, Kim M, Moon BS, Colbert LE. JCO Clin Cancer Inform. 2021 Jan;5:36-44. doi: 10.1200/CCI.20.00115. PMID: 33411621 Free article.
Effect of Antibiotics on Gut and Vaginal Microbiomes Associated with Cervical Cancer Development in Mice
Karpinets TV, Solley TN, Mikkelson MD, Dorta-Estremera S, Nookala SS, Medrano AYD, Petrosino JF, Mezzari MP, Zhang J, Futreal PA, Sastry KJ, Colbert LE, Klopp A.Cancer Prev Res (Phila). 2020 Dec;13(12):997-1006. doi: 10.1158/1940-6207. CAPR-20-0103. Epub 2020 Sep 11. PMID: 32917644
Applying to Radiation Oncology Amid a Pandemic
Kouzy R, Abi Jaoude J, Yue J, Maldonado JA, Taniguchi CM, Ludmir EB, Colbert LE. Adv Radiat Oncol. 2020 Jul 2;5(4):777-779. doi: 10.1016/j.adro.2020.06.017. eCollection 2020 Jul-Aug. PMID: 32775792 Free PMC article. No abstract available.
Tumor microbial diversity and compositional differences among women in Botswana with high-grade cervical dysplasia and cervical cancer
Sims TT, Biegert GWG, Ramogola-Masire D, Ngoni K, Solley T, Ning MS, El Alam MB, Mezzari M, Petrosino J, Zetola NM, Schmeler KM, Colbert LE, Klopp AH, Grover S.Int J Gynecol Cancer. 2020 Aug;30(8):1151-1156. doi: 10.1136/ijgc-2020-001547. Epub 2020 Jul 16. PMID: 32675252 Free PMC article.
Patient-Reported GI Outcomes in Patients With Anal Cancer Receiving Modern Chemoradiation
Kouzy R, Abi Jaoude J, Lin D, El Alam MB, Minsky BD, Koay EJ, Das P, Holliday EB, Klopp AH, Colbert LE, Taniguchi CM. JCO Oncol Pract. 2020 Dec;16(12):e1524-e1531. doi: 10.1200/OP.20.00122. Epub 2020 Jul 1. PMID: 32609585 Free PMC article.
Microbiome factors in HPV-driven carcinogenesis and cancers
Lin D, Kouzy R, Abi Jaoude J, Noticewala SS, Delgado Medrano AY, Klopp AH, Taniguchi CM, Colbert LE. PLoS Pathog. 2020 Jun 4;16(6):e1008524. doi: 10.1371/journal.ppat.1008524. eCollection 2020 Jun. PMID: 32497113 Free PMC article. Review. No abstract available.
Cancer Research after COVID-19: Where Do We Go from Here?
Colbert LE, Kouzy R, Abi Jaoude J, Ludmir EB, Taniguchi CM.Cancer Cell. 2020 May 11;37(5):637-638. doi: 10.1016/j.ccell.2020.04.003. PMID: 32396859 Free PMC article. No abstract available.
Immunotherapy and Radiation
Colbert LE, Jhingran A.Adv Exp Med Biol. 2020;1244:205-213. doi: 10.1007/978-3-030-41008-7_9. PMID: 32301016 Review.
Evaluation of the Visibility and Artifacts of 11 Common Fiducial Markers for Image Guided Stereotactic Body Radiation Therapy in the Abdomen
Slagowski JM, Colbert LE, Cazacu IM, Singh BS, Martin R, Koay EJ, Taniguchi CM, Koong AC, Bhutani MS, Herman JM, Beddar S.Pract Radiat Oncol. 2020 Nov-Dec;10(6):434-442. doi: 10.1016/j.prro.2020.01.007. Epub 2020 Jan 24. PMID: 31988039
Microbial Diversity and Composition Is Associated with Patient-Reported Toxicity during Chemoradiation Therapy for Cervical Cancer
Mitra A, Grossman Biegert GW, Delgado AY, Karpinets TV, Solley TN, Mezzari MP, Yoshida-Court K, Petrosino JF, Mikkelson MD, Lin L, Eifel P, Zhang J, Ramondetta LM, Jhingran A, Sims TT, Schmeler K, Okhuysen P, Colbert LE, Klopp AH. Int J Radiat Oncol Biol Phys. 2020 May 1;107(1):163-171. doi: 10.1016/j.ijrobp.2019.12.040. Epub 2020 Jan 25. PMID: 31987960 Free PMC article. Clinical Trial.
Top Concerns of Radiation Oncology Trainees in 2019: Job Market, Board Examinations, and Residency Expansion
Kahn J, Goodman CR, Albert A, Agarwal A, Jeans E, Tye K, Campbell SR, Marcrom S, Colbert LE. Int J Radiat Oncol Biol Phys. 2020 Jan 1;106(1):19-25. doi: 10.1016/j.ijrobp.2019.07.006. Epub 2019 Oct 21. PMID: 31648872 No abstract available.
Gut microbial diversity and genus-level differences identified in cervical cancer patients versus healthy controls
Sims TT, Colbert LE, Zheng J, Delgado Medrano AY, Hoffman KL, Ramondetta L, Jazaeri A, Jhingran A, Schmeler KM, Daniel CR, Klopp A.Gynecol Oncol. 2019 Nov;155(2):237-244. doi: 10.1016/j.ygyno.2019.09.002. Epub 2019 Sep 26. PMID: 31500892 Free PMC article.
A Survey Study of Female Radiation Oncology Residents' Experiences to Inform Change
Osborn VW, Doke K, Griffith KA, Jones R, Lee A, Maquilan G, Masters AH, Albert AA, Dover LL, Puckett LL, Hentz C, Kahn JM, Colbert LE, Barry PN, Jagsi R.Int J Radiat Oncol Biol Phys. 2019 Aug 1;104(5):999-1008. doi: 10.1016/j.ijrobp.2019.05.013. Epub 2019 May 17. PMID: 31108141
Selective EGLN Inhibition Enables Ablative Radiotherapy and Improves Survival in Unresectable Pancreatic Cancer
Fujimoto TN, Colbert LE, Huang Y, Molkentine JM, Deorukhkar A, Baseler L, de la Cruz Bonilla M, Yu M, Lin D, Gupta S, Cabeceiras PK, Kingsley CV, Tailor RC, Sawakuchi GO, Koay EJ, Piwnica-Worms H, Maitra A, Taniguchi CM. Cancer Res. 2019 May 1;79(9):2327-2338. doi: 10.1158/0008-5472.CAN-18-1785. PMID: 31043430 Free PMC article.
Brachytherapy Training Survey of Radiation Oncology Residents
Marcrom SR, Kahn JM, Colbert LE, Freese CM, Doke KN, Yang JC, Yashar CM, Luu M, Kamrava M. Int J Radiat Oncol Biol Phys. 2019 Mar 1;103(3):557-560. doi: 10.1016/j.ijrobp.2018.10.023. Epub 2018 Oct 26. PMID: 30612963